Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC34P49427 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC34P49427 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.72□□□□□ -0.21
CDC34P49427 AC092171.3-201ENST00000610122 2651 ntBASIC13.72□□□□□ -0.21
CDC34P49427 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CDC34P49427 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC34P49427 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CDC34P49427 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDC34P49427 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC34P49427 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CDC34P49427 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDC34P49427 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CDC34P49427 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDC34P49427 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC34P49427 AL662844.4-201ENST00000606367 2838 ntBASIC13.71□□□□□ -0.21
CDC34P49427 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDC34P49427 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC34P49427 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.71□□□□□ -0.21
CDC34P49427 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.71□□□□□ -0.21
CDC34P49427 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CDC34P49427 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC34P49427 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.71□□□□□ -0.22
CDC34P49427 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.71□□□□□ -0.22
CDC34P49427 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC34P49427 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC34P49427 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC34P49427 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CDC34P49427 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC34P49427 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC34P49427 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC34P49427 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CDC34P49427 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.71□□□□□ -0.22
CDC34P49427 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.71□□□□□ -0.22
CDC34P49427 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 AC007950.2-201ENST00000615045 2347 ntBASIC13.7□□□□□ -0.22
CDC34P49427 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC34P49427 AC092053.1-201ENST00000605787 1936 ntBASIC13.7□□□□□ -0.22
CDC34P49427 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 AC093525.9-201ENST00000624961 1746 ntBASIC13.7□□□□□ -0.22
CDC34P49427 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDC34P49427 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC34P49427 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC34P49427 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC34P49427 CRYGFP-201ENST00000418459 633 ntBASIC13.7□□□□□ -0.22
CDC34P49427 FAM197Y1-201ENST00000421178 764 ntBASIC13.7□□□□□ -0.22
CDC34P49427 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.7□□□□□ -0.22
CDC34P49427 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.7□□□□□ -0.22
CDC34P49427 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC34P49427 AP003041.3-201ENST00000527151 707 ntBASIC13.7□□□□□ -0.22
CDC34P49427 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.7□□□□□ -0.22
CDC34P49427 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC34P49427 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 AL139327.4-201ENST00000612362 153 ntBASIC13.7□□□□□ -0.22
CDC34P49427 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDC34P49427 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CDC34P49427 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CDC34P49427 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms