Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HADHAP40939 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.53■□□□□ 0.4
HADHAP40939 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHAP40939 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHAP40939 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HADHAP40939 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HADHAP40939 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.52■□□□□ 0.4
HADHAP40939 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.52■□□□□ 0.4
HADHAP40939 NUS1P1-201ENST00000446295 882 ntBASIC17.52■□□□□ 0.4
HADHAP40939 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 KRT16P4-201ENST00000453883 522 ntBASIC17.52■□□□□ 0.4
HADHAP40939 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
HADHAP40939 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.52■□□□□ 0.4
HADHAP40939 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
HADHAP40939 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.52■□□□□ 0.4
HADHAP40939 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.52■□□□□ 0.4
HADHAP40939 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HADHAP40939 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHAP40939 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.52■□□□□ 0.4
HADHAP40939 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HADHAP40939 NKILA-202ENST00000614771 2598 ntBASIC17.52■□□□□ 0.39
HADHAP40939 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHAP40939 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHAP40939 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHAP40939 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHAP40939 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HADHAP40939 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HADHAP40939 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HADHAP40939 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHAP40939 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
HADHAP40939 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.51■□□□□ 0.39
HADHAP40939 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.51■□□□□ 0.39
HADHAP40939 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
HADHAP40939 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.51■□□□□ 0.39
HADHAP40939 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.51■□□□□ 0.39
HADHAP40939 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.51■□□□□ 0.39
HADHAP40939 KRT8P10-201ENST00000450021 1447 ntBASIC17.51■□□□□ 0.39
HADHAP40939 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.51■□□□□ 0.39
HADHAP40939 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.51■□□□□ 0.39
HADHAP40939 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.51■□□□□ 0.39
HADHAP40939 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HADHAP40939 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.51■□□□□ 0.39
HADHAP40939 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
HADHAP40939 AD001527.2-201ENST00000622994 785 ntBASIC17.51■□□□□ 0.39
HADHAP40939 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.51■□□□□ 0.39
HADHAP40939 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
HADHAP40939 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HADHAP40939 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HADHAP40939 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HADHAP40939 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HADHAP40939 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.51■□□□□ 0.39
HADHAP40939 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 NFIC-211ENST00000641145 8399 ntBASIC17.5■□□□□ 0.39
HADHAP40939 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms