Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1O96005 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.39■□□□□ 0.21
CLPTM1O96005 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CLPTM1O96005 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CLPTM1O96005 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1O96005 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.39■□□□□ 0.21
CLPTM1O96005 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.39■□□□□ 0.21
CLPTM1O96005 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.39■□□□□ 0.21
CLPTM1O96005 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1O96005 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLPTM1O96005 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1O96005 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CLPTM1O96005 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLPTM1O96005 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1O96005 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1O96005 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.38■□□□□ 0.21
CLPTM1O96005 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CLPTM1O96005 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.38■□□□□ 0.21
CLPTM1O96005 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLPTM1O96005 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLPTM1O96005 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.38■□□□□ 0.21
CLPTM1O96005 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.38■□□□□ 0.21
CLPTM1O96005 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.38■□□□□ 0.21
CLPTM1O96005 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.38■□□□□ 0.21
CLPTM1O96005 AP005242.2-201ENST00000580065 1175 ntBASIC16.38■□□□□ 0.21
CLPTM1O96005 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CLPTM1O96005 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.38■□□□□ 0.21
CLPTM1O96005 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 AC096733.2-201ENST00000609937 1394 ntBASIC16.38■□□□□ 0.21
CLPTM1O96005 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLPTM1O96005 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1O96005 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.37■□□□□ 0.21
CLPTM1O96005 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLPTM1O96005 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLPTM1O96005 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLPTM1O96005 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 ECEL1P3-201ENST00000427961 737 ntBASIC16.37■□□□□ 0.21
CLPTM1O96005 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLPTM1O96005 CKBP1-201ENST00000565489 1086 ntBASIC16.37■□□□□ 0.21
CLPTM1O96005 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CLPTM1O96005 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLPTM1O96005 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLPTM1O96005 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.37■□□□□ 0.21
CLPTM1O96005 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 AC099063.4-201ENST00000641099 1602 ntBASIC16.37■□□□□ 0.21
CLPTM1O96005 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLPTM1O96005 AC116353.5-201ENST00000638148 1699 ntBASIC16.37■□□□□ 0.21
CLPTM1O96005 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CLPTM1O96005 AC099343.3-201ENST00000605834 2503 ntBASIC16.37■□□□□ 0.21
CLPTM1O96005 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 AC092384.3-202ENST00000564646 2873 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms