Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GPC4O75487 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.39■□□□□ 0.37
GPC4O75487 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.39■□□□□ 0.37
GPC4O75487 AC009533.2-201ENST00000543664 586 ntBASIC17.39■□□□□ 0.37
GPC4O75487 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
GPC4O75487 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.39■□□□□ 0.37
GPC4O75487 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GPC4O75487 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.39■□□□□ 0.37
GPC4O75487 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.39■□□□□ 0.37
GPC4O75487 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
GPC4O75487 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
GPC4O75487 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
GPC4O75487 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.38■□□□□ 0.37
GPC4O75487 NSUN5P1-202ENST00000421140 1535 ntBASIC17.38■□□□□ 0.37
GPC4O75487 NSUN5P2-203ENST00000457352 1529 ntBASIC17.38■□□□□ 0.37
GPC4O75487 CROCCP2-202ENST00000412962 2773 ntBASIC17.38■□□□□ 0.37
GPC4O75487 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GPC4O75487 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
GPC4O75487 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.38■□□□□ 0.37
GPC4O75487 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
GPC4O75487 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.38■□□□□ 0.37
GPC4O75487 AC012615.1-201ENST00000565797 1299 ntBASIC17.38■□□□□ 0.37
GPC4O75487 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.38■□□□□ 0.37
GPC4O75487 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.38■□□□□ 0.37
GPC4O75487 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.38■□□□□ 0.37
GPC4O75487 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GPC4O75487 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GPC4O75487 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
GPC4O75487 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
GPC4O75487 LINC00304-203ENST00000565008 1864 ntBASIC17.37■□□□□ 0.37
GPC4O75487 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.37■□□□□ 0.37
GPC4O75487 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
GPC4O75487 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.37■□□□□ 0.37
GPC4O75487 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.37■□□□□ 0.37
GPC4O75487 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 AC124067.4-201ENST00000519691 2379 ntBASIC17.37■□□□□ 0.37
GPC4O75487 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.37■□□□□ 0.37
GPC4O75487 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.37■□□□□ 0.37
GPC4O75487 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GPC4O75487 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
GPC4O75487 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
GPC4O75487 AC005104.2-201ENST00000427818 678 ntBASIC17.37■□□□□ 0.37
GPC4O75487 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.37■□□□□ 0.37
GPC4O75487 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.37■□□□□ 0.37
GPC4O75487 AP000867.3-201ENST00000524675 377 ntBASIC17.37■□□□□ 0.37
GPC4O75487 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.37■□□□□ 0.37
GPC4O75487 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.37■□□□□ 0.37
GPC4O75487 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 BNIP3P18-201ENST00000593976 575 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms