Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.52■□□□□ 0.39
CDH16O75309 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH16O75309 AC079328.2-201ENST00000561241 3354 ntBASIC17.51■□□□□ 0.39
CDH16O75309 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH16O75309 AL391807.1-203ENST00000604392 2365 ntBASIC17.51■□□□□ 0.39
CDH16O75309 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH16O75309 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 ECEL1P3-201ENST00000427961 737 ntBASIC17.51■□□□□ 0.39
CDH16O75309 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH16O75309 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH16O75309 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDH16O75309 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 AL136038.4-201ENST00000603606 1261 ntBASIC17.51■□□□□ 0.39
CDH16O75309 LINC01023-201ENST00000606054 436 ntBASIC17.51■□□□□ 0.39
CDH16O75309 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH16O75309 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CDH16O75309 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDH16O75309 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH16O75309 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH16O75309 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH16O75309 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
CDH16O75309 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH16O75309 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 COX5BP2-201ENST00000392354 334 ntBASIC17.5■□□□□ 0.39
CDH16O75309 AC087499.1-201ENST00000418141 1075 ntBASIC17.5■□□□□ 0.39
CDH16O75309 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH16O75309 MTCL1P1-201ENST00000446207 792 ntBASIC17.5■□□□□ 0.39
CDH16O75309 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH16O75309 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH16O75309 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDH16O75309 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDH16O75309 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH16O75309 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH16O75309 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH16O75309 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH16O75309 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH16O75309 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH16O75309 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH16O75309 AC097374.2-201ENST00000618617 1306 ntBASIC17.49■□□□□ 0.39
CDH16O75309 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH16O75309 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH16O75309 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH16O75309 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH16O75309 AC022188.1-201ENST00000620960 1664 ntBASIC17.49■□□□□ 0.39
CDH16O75309 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CDH16O75309 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH16O75309 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH16O75309 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH16O75309 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH16O75309 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH16O75309 AC010947.1-201ENST00000623454 693 ntBASIC17.49■□□□□ 0.39
CDH16O75309 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH16O75309 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH16O75309 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms