Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ATP2A1O14983 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 FAM58CP-201ENST00000435741 640 ntBASIC19.75■□□□□ 0.75
ATP2A1O14983 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ATP2A1O14983 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP2A1O14983 AL355385.1-201ENST00000606123 409 ntBASIC19.75■□□□□ 0.75
ATP2A1O14983 AC091812.2-201ENST00000619081 385 ntBASIC19.75■□□□□ 0.75
ATP2A1O14983 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP2A1O14983 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP2A1O14983 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ATP2A1O14983 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP2A1O14983 AC068137.2-201ENST00000605408 478 ntBASIC19.74■□□□□ 0.75
ATP2A1O14983 AC092902.6-201ENST00000641783 218 ntBASIC19.74■□□□□ 0.75
ATP2A1O14983 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATP2A1O14983 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATP2A1O14983 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
ATP2A1O14983 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2A1O14983 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 LYSMD4-203ENST00000378904 2122 ntBASIC19.73■□□□□ 0.75
ATP2A1O14983 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
ATP2A1O14983 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2A1O14983 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP2A1O14983 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP2A1O14983 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2A1O14983 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
ATP2A1O14983 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP2A1O14983 HMGN1P19-201ENST00000436976 333 ntBASIC19.73■□□□□ 0.75
ATP2A1O14983 AP000344.2-201ENST00000512987 629 ntBASIC19.73■□□□□ 0.75
ATP2A1O14983 AP002472.1-201ENST00000577490 586 ntBASIC19.73■□□□□ 0.75
ATP2A1O14983 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2A1O14983 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2A1O14983 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2A1O14983 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2A1O14983 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP2A1O14983 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATP2A1O14983 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2A1O14983 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.73■□□□□ 0.75
ATP2A1O14983 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2A1O14983 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
ATP2A1O14983 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2A1O14983 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP2A1O14983 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.72■□□□□ 0.75
ATP2A1O14983 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.72■□□□□ 0.75
ATP2A1O14983 METTL21AP1-201ENST00000438852 635 ntBASIC19.72■□□□□ 0.75
ATP2A1O14983 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.72■□□□□ 0.75
ATP2A1O14983 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.72■□□□□ 0.75
ATP2A1O14983 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATP2A1O14983 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms