Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AL353593.2-201ENST00000602529 1483 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AC132938.5-201ENST00000624980 1813 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 MIR1233-2-201ENST00000408138 82 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 MIR1233-1-201ENST00000408722 82 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 KLF4P1-201ENST00000412782 1185 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AL591424.1-201ENST00000442569 1213 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 KRT18P3-201ENST00000451602 1288 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 AL355312.1-201ENST00000407115 2176 ntBASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 LINC01451-201ENST00000623792 534 ntBASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA3F8WFD2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NPIPA3F8WFD2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AC148477.5-201ENST00000625164 1645 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AC003669.1-201ENST00000334569 611 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms