Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 AC025062.2-201ENST00000605477 670 ntBASIC16.44■□□□□ 0.22
LRIT2A6NDA9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 OR6D1P-202ENST00000641007 5290 ntBASIC16.44■□□□□ 0.22
LRIT2A6NDA9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRIT2A6NDA9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 RNPS1P1-201ENST00000507437 918 ntBASIC16.43■□□□□ 0.22
LRIT2A6NDA9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
LRIT2A6NDA9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AC079781.3-201ENST00000449110 356 ntBASIC16.42■□□□□ 0.22
LRIT2A6NDA9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 FAM197Y8-203ENST00000450145 560 ntBASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AC139887.3-201ENST00000568585 713 ntBASIC16.42■□□□□ 0.22
LRIT2A6NDA9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AL353135.1-201ENST00000606729 504 ntBASIC16.42■□□□□ 0.22
LRIT2A6NDA9 TP73-AS1-207ENST00000624167 988 ntBASIC16.42■□□□□ 0.22
LRIT2A6NDA9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms