Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 TSPY22P-201ENST00000427496 604 ntBASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 RN7SL606P-201ENST00000472779 293 ntBASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 AC011840.4-201ENST00000578471 627 ntBASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 LINC02012-201ENST00000608206 1725 ntBASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THUMPD1Q9NXG2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 AC093525.9-201ENST00000624961 1746 ntBASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 FAM220CP-201ENST00000395253 831 ntBASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 SPDYE13P-201ENST00000445314 798 ntBASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 AC019129.2-201ENST00000609837 1235 ntBASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 FLJ38576-201ENST00000623820 2459 ntBASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
THUMPD1Q9NXG2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms