Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AL133373.2-201ENST00000623187 2828 ntBASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 AC046185.3-201ENST00000623228 1824 ntBASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 GNAS-203ENST00000306120 1878 ntBASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM7Q9NR12 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 AL135999.2-201ENST00000622438 1686 ntBASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 PMS2P4-201ENST00000412466 1052 ntBASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDLIM7Q9NR12 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM7Q9NR12 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM7Q9NR12 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.27■□□□□ 0.67
PDLIM7Q9NR12 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM7Q9NR12 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM7Q9NR12 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AC015911.4-201ENST00000588022 1070 ntBASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 AC097637.2-201ENST00000624096 1997 ntBASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms