Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC127459.2-201ENST00000567395 932 ntTSL 3 BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 BNIP3P28-201ENST00000603918 1193 ntBASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 AL360085.1-201ENST00000604713 532 ntBASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 AC055764.2-201ENST00000610089 670 ntBASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 SLC2AXP1-201ENST00000612939 909 ntBASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 CASC22-202ENST00000628396 802 ntTSL 5 BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 AC006026.1-201ENST00000444025 1803 ntBASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 YES1P1-201ENST00000418510 1628 ntBASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 AC090061.1-202ENST00000502102 1449 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-3Q9BYR6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP3-3Q9BYR6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP3-3Q9BYR6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP3-3Q9BYR6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 GNA13-202ENST00000541118 1502 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 FBXW4P1-201ENST00000426721 2239 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AL024507.2-201ENST00000606070 2574 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 BPNT1-202ENST00000354807 1152 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 RN7SKP168-201ENST00000410910 300 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AL627389.1-201ENST00000413508 1182 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 HMGN1P4-201ENST00000419500 290 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AL353729.1-201ENST00000425044 720 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 MRPL42P4-201ENST00000453267 443 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 DLEU1-209ENST00000468522 1158 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 RPL6P7-201ENST00000488873 853 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 DLEU1-232ENST00000491341 1141 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC034244.1-201ENST00000507687 207 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC008677.3-201ENST00000519146 666 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 C1QBPP2-201ENST00000528754 825 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ADSSL1-210ENST00000556623 652 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AL356801.1-201ENST00000559320 294 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 DOCK9-AS2-201ENST00000562781 807 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ZNF227-210ENST00000589707 504 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AL645933.2-201ENST00000606743 1207 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC121338.2-201ENST00000622535 1744 ntBASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC02201-202ENST00000511194 1651 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-3Q9BYR6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms