Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.18□□□□□ -0.3
VGLL1Q99990 HLA-F-220ENST00000434407 884 ntBASIC13.18□□□□□ -0.3
VGLL1Q99990 AL441883.1-201ENST00000566170 1045 ntBASIC13.18□□□□□ -0.3
VGLL1Q99990 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.18□□□□□ -0.3
VGLL1Q99990 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 AL139327.4-201ENST00000612362 153 ntBASIC13.18□□□□□ -0.3
VGLL1Q99990 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.18□□□□□ -0.3
VGLL1Q99990 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 AC105020.1-201ENST00000435356 2205 ntBASIC13.18□□□□□ -0.3
VGLL1Q99990 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.18□□□□□ -0.3
VGLL1Q99990 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.18□□□□□ -0.3
VGLL1Q99990 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VGLL1Q99990 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.18□□□□□ -0.3
VGLL1Q99990 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.17□□□□□ -0.3
VGLL1Q99990 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 AC103702.1-201ENST00000548801 2630 ntBASIC13.17□□□□□ -0.3
VGLL1Q99990 FLJ38576-201ENST00000623820 2459 ntBASIC13.17□□□□□ -0.3
VGLL1Q99990 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
VGLL1Q99990 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VGLL1Q99990 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.17□□□□□ -0.3
VGLL1Q99990 AL596275.1-201ENST00000423464 877 ntBASIC13.17□□□□□ -0.3
VGLL1Q99990 SPDYE15P-201ENST00000424157 909 ntBASIC13.17□□□□□ -0.3
VGLL1Q99990 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.17□□□□□ -0.3
VGLL1Q99990 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.17□□□□□ -0.3
VGLL1Q99990 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.17□□□□□ -0.3
VGLL1Q99990 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 AC046185.3-201ENST00000623228 1824 ntBASIC13.17□□□□□ -0.3
VGLL1Q99990 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VGLL1Q99990 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VGLL1Q99990 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 PCDHB19P-201ENST00000570871 2371 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
VGLL1Q99990 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
VGLL1Q99990 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms