Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 RPS15P9-201ENST00000494093 319 ntBASIC20.25■□□□□ 0.83
TRIM47Q96LD4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 PDPK2P-202ENST00000562415 1191 ntBASIC20.25■□□□□ 0.83
TRIM47Q96LD4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
TRIM47Q96LD4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 AL020989.1-201ENST00000422979 469 ntBASIC20.23■□□□□ 0.83
TRIM47Q96LD4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM47Q96LD4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 FLJ13224-201ENST00000313737 1514 ntBASIC20.22■□□□□ 0.83
TRIM47Q96LD4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 AC093512.1-201ENST00000617969 520 ntBASIC20.22■□□□□ 0.83
TRIM47Q96LD4 AC004877.2-201ENST00000623941 599 ntBASIC20.22■□□□□ 0.83
TRIM47Q96LD4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM47Q96LD4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM47Q96LD4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM47Q96LD4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM47Q96LD4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM47Q96LD4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRIM47Q96LD4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms