Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 RPSAP52-203ENST00000622976 1023 ntBASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 AL353732.1-201ENST00000569618 1459 ntBASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AL353779.1-201ENST00000434793 351 ntBASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AC007967.4-201ENST00000614700 386 ntBASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 RN7SL752P-201ENST00000463779 287 ntBASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AC099548.2-209ENST00000480264 625 ntBASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 RARRES2P9-201ENST00000565168 469 ntBASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 KRT223P-202ENST00000449164 1292 ntBASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 GPR182-203ENST00000622922 591 ntBASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ALMS1Q8TCU4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 CETN4P-206ENST00000642099 2168 ntBASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 FAM86MP-201ENST00000340703 885 ntBASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 INE1-201ENST00000456273 945 ntBASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 AC005412.3-201ENST00000580309 715 ntBASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms