Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 ACTG1P4-201ENST00000425123 1122 ntBASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 TPM4P1-201ENST00000436100 807 ntBASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 AC141586.5-201ENST00000624546 2050 ntBASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 AC004817.3-201ENST00000602957 2129 ntBASIC19.96■□□□□ 0.79
CCDC148Q8NFR7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
CCDC148Q8NFR7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.95■□□□□ 0.79
CCDC148Q8NFR7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 AC079781.3-201ENST00000449110 356 ntBASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 AC073648.2-201ENST00000510116 352 ntBASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 MTDHP4-201ENST00000600287 670 ntBASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CCDC148Q8NFR7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 NCF1C-201ENST00000438382 1427 ntBASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 AC116353.5-201ENST00000638148 1699 ntBASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 AC097637.2-201ENST00000624096 1997 ntBASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 AC021087.4-201ENST00000563761 564 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms