Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 NUS1P1-201ENST00000446295 882 ntBASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 AP000867.4-201ENST00000641616 219 ntBASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 AC093525.9-201ENST00000624961 1746 ntBASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ABCD1P5-201ENST00000445663 754 ntBASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 AC132008.2-207ENST00000454517 770 ntBASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 AL135999.2-201ENST00000622438 1686 ntBASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC116Q8IYX3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC116Q8IYX3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC116Q8IYX3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
CCDC116Q8IYX3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC116Q8IYX3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC116Q8IYX3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC116Q8IYX3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC116Q8IYX3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC116Q8IYX3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms