Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 AL135999.2-201ENST00000622438 1686 ntBASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 INTS4P1-201ENST00000438455 1935 ntBASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 IGHV3-47-201ENST00000425060 335 ntBASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 AC074051.2-201ENST00000565115 352 ntBASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 AC114341.1-201ENST00000618070 349 ntBASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL3Q8IVW4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 AC104819.1-201ENST00000504587 486 ntBASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 AC124947.2-201ENST00000547118 1133 ntBASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 AC069148.1-201ENST00000608741 768 ntBASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDKL3Q8IVW4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 RCN1P2-201ENST00000398357 915 ntBASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms