Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 NCF1C-201ENST00000438382 1427 ntBASIC16.63■□□□□ 0.25
RNF44Q7L0R7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 RPS2P28-201ENST00000314255 741 ntBASIC16.63■□□□□ 0.25
RNF44Q7L0R7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.63■□□□□ 0.25
RNF44Q7L0R7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF44Q7L0R7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AC139887.3-201ENST00000568585 713 ntBASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AC008735.5-201ENST00000623544 497 ntBASIC16.62■□□□□ 0.25
RNF44Q7L0R7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AL138688.1-201ENST00000624851 1594 ntBASIC16.62■□□□□ 0.25
RNF44Q7L0R7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 AC067852.2-201ENST00000590513 2313 ntBASIC16.62■□□□□ 0.25
RNF44Q7L0R7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF44Q7L0R7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF44Q7L0R7 ACTG1P4-201ENST00000425123 1122 ntBASIC16.61■□□□□ 0.25
RNF44Q7L0R7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms