Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 HTR5BP-201ENST00000430851 1154 ntBASIC18.3■□□□□ 0.52
VARS2Q5ST30 CXCL1P1-201ENST00000502804 216 ntBASIC18.3■□□□□ 0.52
VARS2Q5ST30 YBX1P5-201ENST00000509441 847 ntBASIC18.3■□□□□ 0.52
VARS2Q5ST30 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 MIR4469-201ENST00000583919 79 ntBASIC18.3■□□□□ 0.52
VARS2Q5ST30 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 AL078644.1-201ENST00000609881 752 ntBASIC18.3■□□□□ 0.52
VARS2Q5ST30 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.3■□□□□ 0.52
VARS2Q5ST30 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 DNAJB3-202ENST00000449667 1266 ntBASIC18.29■□□□□ 0.52
VARS2Q5ST30 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 AC023141.13-201ENST00000604991 943 ntBASIC18.29■□□□□ 0.52
VARS2Q5ST30 AC007064.4-201ENST00000637740 555 ntBASIC18.29■□□□□ 0.52
VARS2Q5ST30 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.29■□□□□ 0.52
VARS2Q5ST30 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARS2Q5ST30 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 AP006288.1-201ENST00000446065 395 ntBASIC18.28■□□□□ 0.52
VARS2Q5ST30 AC087163.2-201ENST00000457299 853 ntBASIC18.28■□□□□ 0.52
VARS2Q5ST30 SLC25A6P2-201ENST00000497974 877 ntBASIC18.28■□□□□ 0.52
VARS2Q5ST30 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.28■□□□□ 0.52
VARS2Q5ST30 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARS2Q5ST30 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VARS2Q5ST30 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VARS2Q5ST30 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VARS2Q5ST30 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VARS2Q5ST30 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VARS2Q5ST30 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 MKNK2P1-201ENST00000437526 628 ntBASIC18.27■□□□□ 0.52
VARS2Q5ST30 FAM185BP-201ENST00000443595 716 ntBASIC18.27■□□□□ 0.52
VARS2Q5ST30 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
VARS2Q5ST30 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VARS2Q5ST30 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VARS2Q5ST30 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
VARS2Q5ST30 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VARS2Q5ST30 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms