Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.58■□□□□ 0.41
KHDC1Q4VXA5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 TSPY19P-201ENST00000418461 509 ntBASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 TSPY18P-201ENST00000441642 509 ntBASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KHDC1Q4VXA5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 AC097374.2-201ENST00000618617 1306 ntBASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 KRT18P31-201ENST00000506277 1292 ntBASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 AGGF1P2-201ENST00000426656 2106 ntBASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KHDC1Q4VXA5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 PCDHA14-201ENST00000506751 2298 ntBASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 AC106886.4-201ENST00000623557 2502 ntBASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 DOC2GP-204ENST00000639052 2548 ntBASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 AC011467.2-201ENST00000598425 242 ntBASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 AC114341.1-201ENST00000618070 349 ntBASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms