Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 AC064862.7-201ENST00000604520 867 ntBASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN20Q4JDL3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 TP73-AS1-207ENST00000624167 988 ntBASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN20Q4JDL3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 PCDHA12-202ENST00000613593 2588 ntBASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 AL450487.1-201ENST00000426799 995 ntBASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 AC021087.4-201ENST00000563761 564 ntBASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 AC025062.2-201ENST00000605477 670 ntBASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 AL691432.3-201ENST00000621860 400 ntBASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN20Q4JDL3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms