Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 FAM220CP-201ENST00000395253 831 ntBASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 KRT18P58-201ENST00000527480 1120 ntBASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 AC233702.3-201ENST00000578656 1387 ntBASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 IL9RP2-201ENST00000423948 1312 ntBASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 TSPY12P-201ENST00000421279 868 ntBASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AP003733.1-201ENST00000491725 852 ntBASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AC009065.1-201ENST00000564055 1225 ntBASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 AL773604.1-201ENST00000617417 272 ntBASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRFAM7AQ494W8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRFAM7AQ494W8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.21■□□□□ 0.02
CHRFAM7AQ494W8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRFAM7AQ494W8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRFAM7AQ494W8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 AP001094.4-201ENST00000579008 2176 ntBASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 AC093909.1-201ENST00000504731 1122 ntBASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 AC005332.3-201ENST00000589904 676 ntBASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms