Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH8P55286 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 RPS2P28-201ENST00000314255 741 ntBASIC18.47■□□□□ 0.55
CDH8P55286 AC073621.1-201ENST00000392730 636 ntBASIC18.47■□□□□ 0.55
CDH8P55286 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH8P55286 AC092910.1-201ENST00000482027 1129 ntBASIC18.47■□□□□ 0.55
CDH8P55286 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 AL139424.1-201ENST00000607572 797 ntBASIC18.47■□□□□ 0.55
CDH8P55286 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.47■□□□□ 0.55
CDH8P55286 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CDH8P55286 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CDH8P55286 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 AC116353.5-201ENST00000638148 1699 ntBASIC18.47■□□□□ 0.55
CDH8P55286 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CDH8P55286 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH8P55286 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH8P55286 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 AC093525.9-201ENST00000624961 1746 ntBASIC18.46■□□□□ 0.55
CDH8P55286 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDH8P55286 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH8P55286 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 ELK2BP-201ENST00000415014 1224 ntBASIC18.46■□□□□ 0.55
CDH8P55286 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH8P55286 KRT18P27-201ENST00000427733 1299 ntBASIC18.46■□□□□ 0.55
CDH8P55286 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH8P55286 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH8P55286 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH8P55286 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH8P55286 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH8P55286 AC105339.3-201ENST00000560043 636 ntBASIC18.46■□□□□ 0.55
CDH8P55286 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CDH8P55286 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDH8P55286 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH8P55286 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDH8P55286 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH8P55286 AL590787.1-201ENST00000568856 1315 ntBASIC18.46■□□□□ 0.55
CDH8P55286 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDH8P55286 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDH8P55286 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.45■□□□□ 0.54
CDH8P55286 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDH8P55286 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.45■□□□□ 0.54
CDH8P55286 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CDH8P55286 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH8P55286 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.45■□□□□ 0.54
CDH8P55286 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH8P55286 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.45■□□□□ 0.54
CDH8P55286 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.45■□□□□ 0.54
CDH8P55286 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH8P55286 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.45■□□□□ 0.54
CDH8P55286 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CDH8P55286 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.45■□□□□ 0.54
CDH8P55286 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms