Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.48■□□□□ 0.39
LIMK2P53671 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LIMK2P53671 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 AC106886.4-201ENST00000623557 2502 ntBASIC17.48■□□□□ 0.39
LIMK2P53671 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
LIMK2P53671 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 SLC25A1P3-201ENST00000395415 828 ntBASIC17.48■□□□□ 0.39
LIMK2P53671 NUS1P2-201ENST00000417358 873 ntBASIC17.48■□□□□ 0.39
LIMK2P53671 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.48■□□□□ 0.39
LIMK2P53671 AP002469.2-201ENST00000531724 424 ntBASIC17.48■□□□□ 0.39
LIMK2P53671 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LIMK2P53671 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.48■□□□□ 0.39
LIMK2P53671 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.48■□□□□ 0.39
LIMK2P53671 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LIMK2P53671 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.47■□□□□ 0.39
LIMK2P53671 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LIMK2P53671 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 SAPCD2P3-201ENST00000455031 850 ntBASIC17.47■□□□□ 0.39
LIMK2P53671 AC106795.1-205ENST00000512851 1056 ntBASIC17.47■□□□□ 0.39
LIMK2P53671 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LIMK2P53671 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.47■□□□□ 0.39
LIMK2P53671 REXO1L6P-202ENST00000619970 1078 ntBASIC17.47■□□□□ 0.39
LIMK2P53671 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.47■□□□□ 0.39
LIMK2P53671 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LIMK2P53671 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
LIMK2P53671 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.47■□□□□ 0.39
LIMK2P53671 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIMK2P53671 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.46■□□□□ 0.39
LIMK2P53671 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LIMK2P53671 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 AKR1C7P-201ENST00000305623 895 ntBASIC17.46■□□□□ 0.39
LIMK2P53671 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.46■□□□□ 0.39
LIMK2P53671 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.46■□□□□ 0.39
LIMK2P53671 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.46■□□□□ 0.39
LIMK2P53671 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 AL662844.1-201ENST00000546340 181 ntBASIC17.46■□□□□ 0.39
LIMK2P53671 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LIMK2P53671 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LIMK2P53671 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.46■□□□□ 0.39
LIMK2P53671 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.46■□□□□ 0.39
LIMK2P53671 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LIMK2P53671 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
LIMK2P53671 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 AC046185.3-201ENST00000623228 1824 ntBASIC17.46■□□□□ 0.39
LIMK2P53671 LINC02012-201ENST00000608206 1725 ntBASIC17.46■□□□□ 0.39
LIMK2P53671 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIMK2P53671 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LIMK2P53671 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
LIMK2P53671 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LIMK2P53671 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
LIMK2P53671 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
LIMK2P53671 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.38
LIMK2P53671 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms