Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC007967.3-201ENST00000434308 558 ntBASIC18.05■□□□□ 0.48
MMP13P45452 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.05■□□□□ 0.48
MMP13P45452 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.05■□□□□ 0.48
MMP13P45452 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP13P45452 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MMP13P45452 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MMP13P45452 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MMP13P45452 AC008894.3-201ENST00000624324 3103 ntBASIC18.05■□□□□ 0.48
MMP13P45452 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP13P45452 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP13P45452 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP13P45452 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP13P45452 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP13P45452 REXO1L11P-201ENST00000620964 1927 ntBASIC18.04■□□□□ 0.48
MMP13P45452 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
MMP13P45452 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP13P45452 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.04■□□□□ 0.48
MMP13P45452 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP13P45452 AC009533.2-201ENST00000543664 586 ntBASIC18.04■□□□□ 0.48
MMP13P45452 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP13P45452 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP13P45452 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP13P45452 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.04■□□□□ 0.48
MMP13P45452 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.04■□□□□ 0.48
MMP13P45452 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MMP13P45452 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MMP13P45452 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP13P45452 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
MMP13P45452 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP13P45452 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP13P45452 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 OR6D1P-202ENST00000641007 5290 ntBASIC18.03■□□□□ 0.48
MMP13P45452 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MMP13P45452 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MMP13P45452 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MMP13P45452 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP13P45452 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
MMP13P45452 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.03■□□□□ 0.48
MMP13P45452 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.03■□□□□ 0.48
MMP13P45452 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP13P45452 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
MMP13P45452 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP13P45452 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MMP13P45452 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP13P45452 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MMP13P45452 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP13P45452 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP13P45452 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MMP13P45452 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MMP13P45452 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP13P45452 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP13P45452 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
MMP13P45452 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP13P45452 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP13P45452 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 COX5BP2-201ENST00000392354 334 ntBASIC18.02■□□□□ 0.48
MMP13P45452 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP13P45452 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
MMP13P45452 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.02■□□□□ 0.48
MMP13P45452 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.02■□□□□ 0.48
MMP13P45452 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms