Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
RFC3P40938 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 AC012317.2-201ENST00000623305 2251 ntBASIC15.88■□□□□ 0.13
RFC3P40938 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC3P40938 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC3P40938 AC097637.2-201ENST00000624096 1997 ntBASIC15.88■□□□□ 0.13
RFC3P40938 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
RFC3P40938 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 KRT18P3-201ENST00000451602 1288 ntBASIC15.88■□□□□ 0.13
RFC3P40938 AC108751.1-201ENST00000490852 363 ntBASIC15.88■□□□□ 0.13
RFC3P40938 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.88■□□□□ 0.13
RFC3P40938 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.88■□□□□ 0.13
RFC3P40938 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 AL589182.2-201ENST00000619332 1049 ntBASIC15.88■□□□□ 0.13
RFC3P40938 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC3P40938 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
RFC3P40938 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFC3P40938 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFC3P40938 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC3P40938 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC3P40938 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC3P40938 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC3P40938 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.87■□□□□ 0.13
RFC3P40938 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC3P40938 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RFC3P40938 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.87■□□□□ 0.13
RFC3P40938 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.87■□□□□ 0.13
RFC3P40938 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 AC139530.3-201ENST00000620344 690 ntBASIC15.87■□□□□ 0.13
RFC3P40938 AC004706.3-202ENST00000621574 984 ntBASIC15.87■□□□□ 0.13
RFC3P40938 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
RFC3P40938 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFC3P40938 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC3P40938 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RFC3P40938 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.86■□□□□ 0.13
RFC3P40938 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms