Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNA3P22001 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21■□□□□ 0.95
KCNA3P22001 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21■□□□□ 0.95
KCNA3P22001 AC138969.3-201ENST00000546612 1459 ntBASIC21■□□□□ 0.95
KCNA3P22001 AC138932.2-201ENST00000548268 1459 ntBASIC21■□□□□ 0.95
KCNA3P22001 AC126755.4-201ENST00000549796 1459 ntBASIC21■□□□□ 0.95
KCNA3P22001 CROCCP3-202ENST00000420820 1947 ntBASIC21■□□□□ 0.95
KCNA3P22001 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNA3P22001 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNA3P22001 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
KCNA3P22001 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.99■□□□□ 0.95
KCNA3P22001 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.99■□□□□ 0.95
KCNA3P22001 GIMAP3P-201ENST00000495150 836 ntBASIC20.99■□□□□ 0.95
KCNA3P22001 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.99■□□□□ 0.95
KCNA3P22001 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.99■□□□□ 0.95
KCNA3P22001 AC008738.7-201ENST00000609744 511 ntBASIC20.99■□□□□ 0.95
KCNA3P22001 AC018529.1-201ENST00000613063 361 ntBASIC20.99■□□□□ 0.95
KCNA3P22001 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
KCNA3P22001 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNA3P22001 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNA3P22001 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KCNA3P22001 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
KCNA3P22001 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
KCNA3P22001 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.98■□□□□ 0.95
KCNA3P22001 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.98■□□□□ 0.95
KCNA3P22001 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.98■□□□□ 0.95
KCNA3P22001 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
KCNA3P22001 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.98■□□□□ 0.95
KCNA3P22001 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNA3P22001 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.97■□□□□ 0.95
KCNA3P22001 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.97■□□□□ 0.95
KCNA3P22001 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
KCNA3P22001 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
KCNA3P22001 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
KCNA3P22001 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
KCNA3P22001 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
KCNA3P22001 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.97■□□□□ 0.95
KCNA3P22001 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNA3P22001 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNA3P22001 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNA3P22001 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
KCNA3P22001 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNA3P22001 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.97■□□□□ 0.95
KCNA3P22001 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KCNA3P22001 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms