Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP4AP20648 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP4AP20648 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP4AP20648 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATP4AP20648 SLC25A1P3-201ENST00000395415 828 ntBASIC19.17■□□□□ 0.66
ATP4AP20648 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.17■□□□□ 0.66
ATP4AP20648 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATP4AP20648 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP4AP20648 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP4AP20648 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP4AP20648 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.17■□□□□ 0.66
ATP4AP20648 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP4AP20648 AC010327.4-202ENST00000591484 748 ntBASIC19.17■□□□□ 0.66
ATP4AP20648 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.17■□□□□ 0.66
ATP4AP20648 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP4AP20648 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP4AP20648 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATP4AP20648 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATP4AP20648 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP4AP20648 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP4AP20648 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP4AP20648 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP4AP20648 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP4AP20648 UPF3AP3-201ENST00000420996 769 ntBASIC19.16■□□□□ 0.66
ATP4AP20648 SLC25A6P2-201ENST00000497974 877 ntBASIC19.16■□□□□ 0.66
ATP4AP20648 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP4AP20648 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP4AP20648 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.16■□□□□ 0.66
ATP4AP20648 AC010507.1-201ENST00000633895 436 ntBASIC19.16■□□□□ 0.66
ATP4AP20648 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP4AP20648 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP4AP20648 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP4AP20648 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ATP4AP20648 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP4AP20648 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ATP4AP20648 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ATP4AP20648 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP4AP20648 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATP4AP20648 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP4AP20648 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP4AP20648 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP4AP20648 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP4AP20648 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATP4AP20648 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP4AP20648 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP4AP20648 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP4AP20648 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP4AP20648 GPX1P2-201ENST00000429271 606 ntBASIC19.15■□□□□ 0.66
ATP4AP20648 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP4AP20648 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP4AP20648 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP4AP20648 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ATP4AP20648 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP4AP20648 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP4AP20648 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP4AP20648 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP4AP20648 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP4AP20648 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP4AP20648 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ATP4AP20648 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ATP4AP20648 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.14■□□□□ 0.66
ATP4AP20648 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
ATP4AP20648 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP4AP20648 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP4AP20648 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP4AP20648 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP4AP20648 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ATP4AP20648 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 RHOQP3-201ENST00000437982 621 ntBASIC19.14■□□□□ 0.65
ATP4AP20648 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATP4AP20648 AC096734.2-201ENST00000562054 433 ntBASIC19.14■□□□□ 0.65
ATP4AP20648 AC002347.1-201ENST00000569543 541 ntBASIC19.14■□□□□ 0.65
ATP4AP20648 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATP4AP20648 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.14■□□□□ 0.65
ATP4AP20648 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP4AP20648 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.14■□□□□ 0.65
ATP4AP20648 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP4AP20648 GNAS-203ENST00000306120 1878 ntBASIC19.14■□□□□ 0.65
ATP4AP20648 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms