Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PTPN1P18031 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PTPN1P18031 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN1P18031 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PTPN1P18031 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN1P18031 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTPN1P18031 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTPN1P18031 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPN1P18031 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN1P18031 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 ZNF259P1-201ENST00000407656 1365 ntBASIC18.32■□□□□ 0.52
PTPN1P18031 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PTPN1P18031 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN1P18031 AC009947.1-201ENST00000444350 727 ntBASIC18.32■□□□□ 0.52
PTPN1P18031 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPN1P18031 AC034105.1-201ENST00000563488 319 ntBASIC18.32■□□□□ 0.52
PTPN1P18031 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPN1P18031 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PTPN1P18031 AL805961.1-202ENST00000641562 540 ntBASIC18.32■□□□□ 0.52
PTPN1P18031 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN1P18031 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PTPN1P18031 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN1P18031 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN1P18031 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN1P18031 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN1P18031 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN1P18031 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 MIR574-201ENST00000385209 96 ntBASIC18.31■□□□□ 0.52
PTPN1P18031 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN1P18031 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN1P18031 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTPN1P18031 AC008667.4-201ENST00000607370 168 ntBASIC18.31■□□□□ 0.52
PTPN1P18031 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN1P18031 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN1P18031 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN1P18031 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN1P18031 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN1P18031 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN1P18031 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN1P18031 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 AC020916.1-201ENST00000587762 1774 ntBASIC18.3■□□□□ 0.52
PTPN1P18031 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN1P18031 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN1P18031 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN1P18031 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN1P18031 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN1P18031 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN1P18031 AP002414.1-201ENST00000391405 1147 ntBASIC18.3■□□□□ 0.52
PTPN1P18031 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN1P18031 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN1P18031 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.3■□□□□ 0.52
PTPN1P18031 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 AC108751.1-201ENST00000490852 363 ntBASIC18.3■□□□□ 0.52
PTPN1P18031 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN1P18031 IGHV3-65-201ENST00000523210 341 ntBASIC18.3■□□□□ 0.52
PTPN1P18031 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms