Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
THRAP10827 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.43■□□□□ 0.38
THRAP10827 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.43■□□□□ 0.38
THRAP10827 AC008894.3-201ENST00000624324 3103 ntBASIC17.43■□□□□ 0.38
THRAP10827 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
THRAP10827 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
THRAP10827 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 AC018695.7-201ENST00000624587 2492 ntBASIC17.43■□□□□ 0.38
THRAP10827 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.43■□□□□ 0.38
THRAP10827 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.42■□□□□ 0.38
THRAP10827 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.42■□□□□ 0.38
THRAP10827 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.42■□□□□ 0.38
THRAP10827 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.42■□□□□ 0.38
THRAP10827 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.42■□□□□ 0.38
THRAP10827 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.42■□□□□ 0.38
THRAP10827 AL662844.1-201ENST00000546340 181 ntBASIC17.42■□□□□ 0.38
THRAP10827 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.42■□□□□ 0.38
THRAP10827 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.42■□□□□ 0.38
THRAP10827 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.42■□□□□ 0.38
THRAP10827 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.42■□□□□ 0.38
THRAP10827 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
THRAP10827 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
THRAP10827 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.42■□□□□ 0.38
THRAP10827 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
THRAP10827 CROCCP1-201ENST00000426910 5675 ntBASIC17.42■□□□□ 0.38
THRAP10827 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.42■□□□□ 0.38
THRAP10827 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THRAP10827 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
THRAP10827 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
THRAP10827 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
THRAP10827 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
THRAP10827 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
THRAP10827 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.41■□□□□ 0.38
THRAP10827 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.41■□□□□ 0.38
THRAP10827 AP000347.1-202ENST00000435868 847 ntBASIC17.41■□□□□ 0.38
THRAP10827 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.41■□□□□ 0.38
THRAP10827 AC096582.2-201ENST00000510860 516 ntBASIC17.41■□□□□ 0.38
THRAP10827 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.41■□□□□ 0.38
THRAP10827 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.41■□□□□ 0.38
THRAP10827 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.41■□□□□ 0.38
THRAP10827 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.41■□□□□ 0.38
THRAP10827 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
THRAP10827 AC114341.1-201ENST00000618070 349 ntBASIC17.41■□□□□ 0.38
THRAP10827 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
THRAP10827 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
THRAP10827 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THRAP10827 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
THRAP10827 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
THRAP10827 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THRAP10827 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
THRAP10827 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
THRAP10827 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms