Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RARRES2P8-201ENST00000566335 367 ntBASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CSB-PGBD3P0DP91 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CSB-PGBD3P0DP91 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
CSB-PGBD3P0DP91 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.24
CSB-PGBD3P0DP91 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 REXO1L11P-201ENST00000620964 1927 ntBASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 AP001059.3-201ENST00000619053 235 ntBASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSB-PGBD3P0DP91 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 AC125807.1-201ENST00000483097 614 ntBASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 POLD4-211ENST00000539074 714 ntTSL 3 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 AL512356.2-201ENST00000546955 174 ntBASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 AL139327.4-201ENST00000612362 153 ntBASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSB-PGBD3P0DP91 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 AC107890.1-201ENST00000422478 521 ntBASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 AC002472.2-201ENST00000442739 958 ntBASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 TSPY16P-201ENST00000449843 468 ntBASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 TERF1P3-201ENST00000505638 1227 ntBASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 IGHV3-62-201ENST00000520057 340 ntBASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 THTPA-204ENST00000554970 569 ntTSL 4 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 THTPA-206ENST00000556015 535 ntTSL 3 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 MIR4515-201ENST00000584082 81 ntBASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
CSB-PGBD3P0DP91 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 UXT-AS1-201ENST00000590504 1525 ntBASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms