Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AL450487.1-201ENST00000426799 995 ntBASIC17.69■□□□□ 0.42
MT-ND3P03897 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-ND3P03897 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.69■□□□□ 0.42
MT-ND3P03897 AC092597.1-201ENST00000487352 616 ntBASIC17.69■□□□□ 0.42
MT-ND3P03897 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.69■□□□□ 0.42
MT-ND3P03897 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.69■□□□□ 0.42
MT-ND3P03897 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.69■□□□□ 0.42
MT-ND3P03897 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-ND3P03897 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-ND3P03897 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-ND3P03897 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.69■□□□□ 0.42
MT-ND3P03897 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MT-ND3P03897 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-ND3P03897 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
MT-ND3P03897 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-ND3P03897 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-ND3P03897 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MT-ND3P03897 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
MT-ND3P03897 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MT-ND3P03897 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MT-ND3P03897 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND3P03897 BX276092.7-203ENST00000637198 1536 ntBASIC17.68■□□□□ 0.42
MT-ND3P03897 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
MT-ND3P03897 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MT-ND3P03897 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND3P03897 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND3P03897 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.68■□□□□ 0.42
MT-ND3P03897 SPDYE13P-201ENST00000445314 798 ntBASIC17.68■□□□□ 0.42
MT-ND3P03897 BX276092.5-203ENST00000456199 560 ntBASIC17.68■□□□□ 0.42
MT-ND3P03897 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND3P03897 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.68■□□□□ 0.42
MT-ND3P03897 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.68■□□□□ 0.42
MT-ND3P03897 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.68■□□□□ 0.42
MT-ND3P03897 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.68■□□□□ 0.42
MT-ND3P03897 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 PCDHB19P-201ENST00000570871 2371 ntBASIC17.68■□□□□ 0.42
MT-ND3P03897 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND3P03897 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND3P03897 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MT-ND3P03897 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND3P03897 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
MT-ND3P03897 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MT-ND3P03897 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-ND3P03897 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MT-ND3P03897 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MT-ND3P03897 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-ND3P03897 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MT-ND3P03897 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MT-ND3P03897 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
MT-ND3P03897 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.67■□□□□ 0.42
MT-ND3P03897 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 AC011498.5-201ENST00000592027 486 ntBASIC17.67■□□□□ 0.42
MT-ND3P03897 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-ND3P03897 AL691432.3-201ENST00000621860 400 ntBASIC17.67■□□□□ 0.42
MT-ND3P03897 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms