Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
CNOT4O95628 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.44■□□□□ 0.06
CNOT4O95628 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.44■□□□□ 0.06
CNOT4O95628 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.44■□□□□ 0.06
CNOT4O95628 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.44■□□□□ 0.06
CNOT4O95628 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 AC093909.1-201ENST00000504731 1122 ntBASIC15.44■□□□□ 0.06
CNOT4O95628 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.44■□□□□ 0.06
CNOT4O95628 KRT18P58-201ENST00000527480 1120 ntBASIC15.44■□□□□ 0.06
CNOT4O95628 AC092865.5-201ENST00000545435 363 ntBASIC15.44■□□□□ 0.06
CNOT4O95628 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.44■□□□□ 0.06
CNOT4O95628 NKAPP1-205ENST00000585790 367 ntBASIC15.44■□□□□ 0.06
CNOT4O95628 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.44■□□□□ 0.06
CNOT4O95628 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 AC132938.5-201ENST00000624980 1813 ntBASIC15.44■□□□□ 0.06
CNOT4O95628 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CNOT4O95628 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT4O95628 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CNOT4O95628 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.43■□□□□ 0.06
CNOT4O95628 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.43■□□□□ 0.06
CNOT4O95628 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.43■□□□□ 0.06
CNOT4O95628 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.43■□□□□ 0.06
CNOT4O95628 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.43■□□□□ 0.06
CNOT4O95628 RNA5SP419-201ENST00000515908 135 ntBASIC15.43■□□□□ 0.06
CNOT4O95628 SLC25A1P1-201ENST00000528351 927 ntBASIC15.43■□□□□ 0.06
CNOT4O95628 SART3-203ENST00000546611 1184 ntBASIC15.43■□□□□ 0.06
CNOT4O95628 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.43■□□□□ 0.06
CNOT4O95628 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 AC006116.8-202ENST00000587620 1550 ntBASIC15.43■□□□□ 0.06
CNOT4O95628 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.43■□□□□ 0.06
CNOT4O95628 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CNOT4O95628 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 PKD1P5-201ENST00000532415 10291 ntBASIC15.42■□□□□ 0.06
CNOT4O95628 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CNOT4O95628 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.42■□□□□ 0.06
CNOT4O95628 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 AL031284.1-201ENST00000419297 478 ntBASIC15.42■□□□□ 0.06
CNOT4O95628 STK19B-204ENST00000512515 211 ntBASIC15.42■□□□□ 0.06
CNOT4O95628 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.42■□□□□ 0.06
CNOT4O95628 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 AC021087.4-201ENST00000563761 564 ntBASIC15.42■□□□□ 0.06
CNOT4O95628 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.42■□□□□ 0.06
CNOT4O95628 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CNOT4O95628 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms