Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
VAPBO95292 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VAPBO95292 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.44■□□□□ 0.38
VAPBO95292 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 SLC25A1P3-201ENST00000395415 828 ntBASIC17.44■□□□□ 0.38
VAPBO95292 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.44■□□□□ 0.38
VAPBO95292 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.44■□□□□ 0.38
VAPBO95292 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VAPBO95292 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VAPBO95292 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.44■□□□□ 0.38
VAPBO95292 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.44■□□□□ 0.38
VAPBO95292 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VAPBO95292 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPBO95292 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPBO95292 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
VAPBO95292 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPBO95292 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 AC096582.2-201ENST00000510860 516 ntBASIC17.43■□□□□ 0.38
VAPBO95292 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.43■□□□□ 0.38
VAPBO95292 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.43■□□□□ 0.38
VAPBO95292 MIR3180-1-201ENST00000580374 94 ntBASIC17.43■□□□□ 0.38
VAPBO95292 MIR3180-3-201ENST00000584616 94 ntBASIC17.43■□□□□ 0.38
VAPBO95292 BNIP3P18-201ENST00000593976 575 ntBASIC17.43■□□□□ 0.38
VAPBO95292 AL445228.2-201ENST00000605589 952 ntBASIC17.43■□□□□ 0.38
VAPBO95292 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 AC069148.1-201ENST00000608741 768 ntBASIC17.43■□□□□ 0.38
VAPBO95292 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
VAPBO95292 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VAPBO95292 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPBO95292 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 AC132938.5-201ENST00000624980 1813 ntBASIC17.42■□□□□ 0.38
VAPBO95292 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 LINC02012-201ENST00000608206 1725 ntBASIC17.42■□□□□ 0.38
VAPBO95292 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 ARMC10P1-201ENST00000313754 855 ntBASIC17.42■□□□□ 0.38
VAPBO95292 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
VAPBO95292 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 IGHV3-47-201ENST00000425060 335 ntBASIC17.42■□□□□ 0.38
VAPBO95292 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPBO95292 AP000867.3-201ENST00000524675 377 ntBASIC17.42■□□□□ 0.38
VAPBO95292 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.42■□□□□ 0.38
VAPBO95292 AC074051.2-201ENST00000565115 352 ntBASIC17.42■□□□□ 0.38
VAPBO95292 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
VAPBO95292 NPAP1P7-201ENST00000613027 823 ntBASIC17.42■□□□□ 0.38
VAPBO95292 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPBO95292 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VAPBO95292 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms