Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC009336.1-201ENST00000608941 1553 ntBASIC16.57■□□□□ 0.24
PCDH7O60245 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH7O60245 AC003669.1-201ENST00000334569 611 ntBASIC16.57■□□□□ 0.24
PCDH7O60245 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PCDH7O60245 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH7O60245 KLF4P1-201ENST00000412782 1185 ntBASIC16.57■□□□□ 0.24
PCDH7O60245 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH7O60245 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH7O60245 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDH7O60245 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH7O60245 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.57■□□□□ 0.24
PCDH7O60245 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH7O60245 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH7O60245 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDH7O60245 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH7O60245 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PCDH7O60245 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PCDH7O60245 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PCDH7O60245 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDH7O60245 IGHV3-47-201ENST00000425060 335 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PCDH7O60245 AC104819.1-201ENST00000504587 486 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 AP000867.3-201ENST00000524675 377 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDH7O60245 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
PCDH7O60245 MIR3180-1-201ENST00000580374 94 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 MIR3180-3-201ENST00000584616 94 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH7O60245 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDH7O60245 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 AD001527.2-201ENST00000622994 785 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDH7O60245 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 INTS4P1-201ENST00000438455 1935 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 AC132938.5-201ENST00000624980 1813 ntBASIC16.56■□□□□ 0.24
PCDH7O60245 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH7O60245 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDH7O60245 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDH7O60245 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDH7O60245 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDH7O60245 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH7O60245 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDH7O60245 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
PCDH7O60245 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDH7O60245 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDH7O60245 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH7O60245 AL445228.2-201ENST00000605589 952 ntBASIC16.55■□□□□ 0.24
PCDH7O60245 AC091076.1-201ENST00000610741 619 ntBASIC16.55■□□□□ 0.24
PCDH7O60245 NPAP1P7-201ENST00000613027 823 ntBASIC16.55■□□□□ 0.24
PCDH7O60245 AC073592.5-201ENST00000624854 528 ntBASIC16.55■□□□□ 0.24
PCDH7O60245 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH7O60245 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms