Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXN1O15353 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN1O15353 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FOXN1O15353 FZD10-202ENST00000539839 3282 ntBASIC20.65■□□□□ 0.9
FOXN1O15353 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FOXN1O15353 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN1O15353 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN1O15353 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN1O15353 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXN1O15353 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN1O15353 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.64■□□□□ 0.9
FOXN1O15353 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN1O15353 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN1O15353 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXN1O15353 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 CNN2P2-201ENST00000443536 909 ntBASIC20.64■□□□□ 0.89
FOXN1O15353 CNN2P3-201ENST00000450201 906 ntBASIC20.64■□□□□ 0.89
FOXN1O15353 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXN1O15353 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.64■□□□□ 0.89
FOXN1O15353 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXN1O15353 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXN1O15353 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXN1O15353 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXN1O15353 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
FOXN1O15353 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
FOXN1O15353 AL353135.1-201ENST00000606729 504 ntBASIC20.64■□□□□ 0.89
FOXN1O15353 AL136317.3-201ENST00000618497 906 ntBASIC20.64■□□□□ 0.89
FOXN1O15353 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
FOXN1O15353 REXO1L3P-201ENST00000622202 1288 ntBASIC20.64■□□□□ 0.89
FOXN1O15353 AC009093.7-201ENST00000623853 1223 ntBASIC20.64■□□□□ 0.89
FOXN1O15353 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXN1O15353 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
FOXN1O15353 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXN1O15353 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN1O15353 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN1O15353 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN1O15353 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
FOXN1O15353 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
FOXN1O15353 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.63■□□□□ 0.89
FOXN1O15353 RN7SL692P-201ENST00000464677 288 ntBASIC20.63■□□□□ 0.89
FOXN1O15353 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN1O15353 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.63■□□□□ 0.89
FOXN1O15353 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXN1O15353 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN1O15353 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN1O15353 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FOXN1O15353 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXN1O15353 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN1O15353 AL163051.1-201ENST00000569214 1512 ntBASIC20.63■□□□□ 0.89
FOXN1O15353 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.63■□□□□ 0.89
FOXN1O15353 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN1O15353 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN1O15353 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
FOXN1O15353 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXN1O15353 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXN1O15353 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN1O15353 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
FOXN1O15353 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXN1O15353 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXN1O15353 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 LINC01126-201ENST00000623515 1646 ntBASIC20.62■□□□□ 0.89
FOXN1O15353 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FOXN1O15353 PMPCAP1-201ENST00000508114 1576 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms