Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.5■□□□□ 0.23
CASQ2O14958 AC008040.2-201ENST00000461049 708 ntBASIC16.5■□□□□ 0.23
CASQ2O14958 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.5■□□□□ 0.23
CASQ2O14958 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.5■□□□□ 0.23
CASQ2O14958 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.5■□□□□ 0.23
CASQ2O14958 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.5■□□□□ 0.23
CASQ2O14958 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CASQ2O14958 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.5■□□□□ 0.23
CASQ2O14958 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CASQ2O14958 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 PAUPAR-201ENST00000630360 2965 ntBASIC16.49■□□□□ 0.23
CASQ2O14958 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CASQ2O14958 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 MIR638-201ENST00000385237 100 ntBASIC16.49■□□□□ 0.23
CASQ2O14958 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 AC097658.1-201ENST00000475555 843 ntBASIC16.49■□□□□ 0.23
CASQ2O14958 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.49■□□□□ 0.23
CASQ2O14958 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 AC011298.2-201ENST00000617989 482 ntBASIC16.49■□□□□ 0.23
CASQ2O14958 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASQ2O14958 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CASQ2O14958 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.49■□□□□ 0.23
CASQ2O14958 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 LINC00167-201ENST00000530583 1419 ntBASIC16.48■□□□□ 0.23
CASQ2O14958 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.48■□□□□ 0.23
CASQ2O14958 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.48■□□□□ 0.23
CASQ2O14958 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 NIFKP9-201ENST00000419265 221 ntBASIC16.48■□□□□ 0.23
CASQ2O14958 AC005104.2-201ENST00000427818 678 ntBASIC16.48■□□□□ 0.23
CASQ2O14958 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.48■□□□□ 0.23
CASQ2O14958 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.48■□□□□ 0.23
CASQ2O14958 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASQ2O14958 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CASQ2O14958 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.47■□□□□ 0.23
CASQ2O14958 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms