Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.15■□□□□ 0.34
IFRD1O00458 SCARNA2-201ENST00000458748 420 ntBASIC17.15■□□□□ 0.34
IFRD1O00458 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.15■□□□□ 0.34
IFRD1O00458 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.15■□□□□ 0.34
IFRD1O00458 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
IFRD1O00458 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.15■□□□□ 0.34
IFRD1O00458 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFRD1O00458 PMPCAP1-201ENST00000508114 1576 ntBASIC17.15■□□□□ 0.34
IFRD1O00458 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
IFRD1O00458 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 AD000864.1-201ENST00000624076 2295 ntBASIC17.14■□□□□ 0.33
IFRD1O00458 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.14■□□□□ 0.33
IFRD1O00458 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 AP001094.4-201ENST00000579008 2176 ntBASIC17.14■□□□□ 0.33
IFRD1O00458 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 AC003669.1-201ENST00000334569 611 ntBASIC17.14■□□□□ 0.33
IFRD1O00458 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 KLF4P1-201ENST00000412782 1185 ntBASIC17.14■□□□□ 0.33
IFRD1O00458 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.14■□□□□ 0.33
IFRD1O00458 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.14■□□□□ 0.33
IFRD1O00458 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.14■□□□□ 0.33
IFRD1O00458 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 AL355877.3-201ENST00000622820 899 ntBASIC17.14■□□□□ 0.33
IFRD1O00458 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
IFRD1O00458 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.14■□□□□ 0.33
IFRD1O00458 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.14■□□□□ 0.33
IFRD1O00458 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IFRD1O00458 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.14■□□□□ 0.33
IFRD1O00458 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 LINC00304-203ENST00000565008 1864 ntBASIC17.14■□□□□ 0.33
IFRD1O00458 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFRD1O00458 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
IFRD1O00458 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.13■□□□□ 0.33
IFRD1O00458 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
IFRD1O00458 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
IFRD1O00458 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.13■□□□□ 0.33
IFRD1O00458 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.13■□□□□ 0.33
IFRD1O00458 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.13■□□□□ 0.33
IFRD1O00458 STK19B-204ENST00000512515 211 ntBASIC17.13■□□□□ 0.33
IFRD1O00458 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 AF238378.1-201ENST00000526806 358 ntBASIC17.13■□□□□ 0.33
IFRD1O00458 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
IFRD1O00458 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.13■□□□□ 0.33
IFRD1O00458 AL121912.1-201ENST00000603683 238 ntBASIC17.13■□□□□ 0.33
IFRD1O00458 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.13■□□□□ 0.33
IFRD1O00458 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
IFRD1O00458 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.13■□□□□ 0.33
IFRD1O00458 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.13■□□□□ 0.33
IFRD1O00458 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFRD1O00458 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms