Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 AL020989.1-201ENST00000422979 469 ntBASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 UNC93B6-202ENST00000528242 690 ntBASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 AC006557.2-201ENST00000592985 1240 ntBASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 AC139530.3-201ENST00000620344 690 ntBASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 AC073592.4-201ENST00000623827 446 ntBASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AL049757.1-201ENST00000616842 1596 ntBASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 SIGLEC16-201ENST00000599858 1437 ntBASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 BX842568.4-201ENST00000421222 227 ntBASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 PRYP5-201ENST00000451909 266 ntBASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AL356488.2-201ENST00000602755 427 ntBASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 AC067852.2-201ENST00000590513 2313 ntBASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA3F8WFD2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AC109462.3-201ENST00000573934 613 ntBASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 FAM197Y3-203ENST00000618346 717 ntBASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 AC005593.1-201ENST00000624894 515 ntBASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA3F8WFD2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA3F8WFD2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms