Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 RBM17P3-201ENST00000417687 1192 ntBASIC17.32■□□□□ 0.36
CFAP99D6REC4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.32■□□□□ 0.36
CFAP99D6REC4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.32■□□□□ 0.36
CFAP99D6REC4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP99D6REC4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 IFNL4P1-201ENST00000607083 540 ntBASIC17.31■□□□□ 0.36
CFAP99D6REC4 AP000867.4-201ENST00000641616 219 ntBASIC17.31■□□□□ 0.36
CFAP99D6REC4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP99D6REC4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP99D6REC4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 AC106795.1-205ENST00000512851 1056 ntBASIC17.3■□□□□ 0.36
CFAP99D6REC4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 LYSMD4-203ENST00000378904 2122 ntBASIC17.3■□□□□ 0.36
CFAP99D6REC4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.3■□□□□ 0.36
CFAP99D6REC4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CFAP99D6REC4 AP005117.1-201ENST00000584346 1413 ntBASIC17.3■□□□□ 0.36
CFAP99D6REC4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CFAP99D6REC4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CFAP99D6REC4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CFAP99D6REC4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CFAP99D6REC4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CFAP99D6REC4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CFAP99D6REC4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms