Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 AL049757.1-201ENST00000616842 1596 ntBASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 AC104109.2-201ENST00000602919 1418 ntBASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB1Q9Y5F3 PKD1P1-201ENST00000458669 6805 ntBASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 PGAM5P1-201ENST00000518923 814 ntBASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 AL691403.2-201ENST00000618460 490 ntBASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB1Q9Y5F3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 RPS2P28-201ENST00000314255 741 ntBASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 AC021087.4-201ENST00000563761 564 ntBASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 AL353593.2-201ENST00000602529 1483 ntBASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 AC055717.3-201ENST00000622967 595 ntBASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms