Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 LINC01311-201ENST00000565162 1445 ntBASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 AL023803.3-201ENST00000615559 522 ntBASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 AC008741.2-201ENST00000612792 3115 ntBASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
CCM2LQ9NUG4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCM2LQ9NUG4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms