Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TREX1Q9NSU2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.29■□□□□ 0.36
TREX1Q9NSU2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TREX1Q9NSU2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.29■□□□□ 0.36
TREX1Q9NSU2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AC092068.3-201ENST00000587894 2016 ntBASIC17.28■□□□□ 0.36
TREX1Q9NSU2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AC099398.1-201ENST00000567919 2776 ntBASIC17.28■□□□□ 0.36
TREX1Q9NSU2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AP001269.4-201ENST00000609611 512 ntBASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 AP005117.1-201ENST00000584346 1413 ntBASIC17.28■□□□□ 0.36
TREX1Q9NSU2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TREX1Q9NSU2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 GPR89P-201ENST00000407924 1495 ntBASIC17.27■□□□□ 0.36
TREX1Q9NSU2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 AC132008.2-207ENST00000454517 770 ntBASIC17.27■□□□□ 0.36
TREX1Q9NSU2 FOSL1P1-201ENST00000511041 816 ntBASIC17.27■□□□□ 0.36
TREX1Q9NSU2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TREX1Q9NSU2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TREX1Q9NSU2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 AC106795.1-205ENST00000512851 1056 ntBASIC17.26■□□□□ 0.35
TREX1Q9NSU2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TREX1Q9NSU2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms