Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 KLF4P1-201ENST00000412782 1185 ntBASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 ATP5G2P1-201ENST00000433580 426 ntBASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 AC012615.1-201ENST00000565797 1299 ntBASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 AC092329.2-201ENST00000598402 547 ntBASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 LINC02012-201ENST00000608206 1725 ntBASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 AC132938.5-201ENST00000624980 1813 ntBASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 RCN1P2-201ENST00000398357 915 ntBASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 POM121L3P-201ENST00000419331 1163 ntBASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 AC010331.1-201ENST00000611423 582 ntBASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 AC073592.5-201ENST00000624854 528 ntBASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC40Q9H9A6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 NKILA-202ENST00000614771 2598 ntBASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 AC092119.3-201ENST00000612618 583 ntBASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRRC40Q9H9A6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 470.9 ms