Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 NCF1C-201ENST00000438382 1427 ntBASIC14.42□□□□□ -0.1
GAFA1Q96PS6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.42□□□□□ -0.1
GAFA1Q96PS6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 TPM4P1-201ENST00000436100 807 ntBASIC14.42□□□□□ -0.1
GAFA1Q96PS6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 FAM197Y8-203ENST00000450145 560 ntBASIC14.42□□□□□ -0.1
GAFA1Q96PS6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.41□□□□□ -0.1
GAFA1Q96PS6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 AC104692.2-201ENST00000603054 253 ntBASIC14.41□□□□□ -0.1
GAFA1Q96PS6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 AL589182.2-201ENST00000619332 1049 ntBASIC14.41□□□□□ -0.1
GAFA1Q96PS6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GAFA1Q96PS6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 KRT18P67-201ENST00000432816 1264 ntBASIC14.4□□□□□ -0.1
GAFA1Q96PS6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 RNPS1P1-201ENST00000507437 918 ntBASIC14.4□□□□□ -0.1
GAFA1Q96PS6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 AP002469.2-201ENST00000531724 424 ntBASIC14.4□□□□□ -0.1
GAFA1Q96PS6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 AC139887.3-201ENST00000568585 713 ntBASIC14.4□□□□□ -0.1
GAFA1Q96PS6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms