Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 LINC02012-201ENST00000608206 1725 ntBASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 AP000867.4-201ENST00000641616 219 ntBASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MS4A4EQ96PG1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 SPDYE21P-201ENST00000413323 827 ntBASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 HCG4P8-203ENST00000443049 980 ntBASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 MIR5100-201ENST00000579544 119 ntBASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms