Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 AC107918.4-202ENST00000641623 219 ntBASIC18.3■□□□□ 0.52
ATP2A3Q93084 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 AC104109.2-201ENST00000602919 1418 ntBASIC18.3■□□□□ 0.52
ATP2A3Q93084 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A3Q93084 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A3Q93084 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC098831.1-202ENST00000438821 336 ntBASIC18.29■□□□□ 0.52
ATP2A3Q93084 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC092865.5-201ENST00000545435 363 ntBASIC18.29■□□□□ 0.52
ATP2A3Q93084 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC105339.3-201ENST00000560043 636 ntBASIC18.29■□□□□ 0.52
ATP2A3Q93084 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC139530.3-201ENST00000620344 690 ntBASIC18.29■□□□□ 0.52
ATP2A3Q93084 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC079776.2-201ENST00000641154 1609 ntBASIC18.29■□□□□ 0.52
ATP2A3Q93084 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms