Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE2Q8WXH0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE2Q8WXH0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 TPM3P8-201ENST00000330554 643 ntBASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 SERBP1P2-201ENST00000436888 1164 ntBASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 AC097637.2-201ENST00000624096 1997 ntBASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 AC012362.1-201ENST00000434906 739 ntBASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 AC015912.3-201ENST00000619432 348 ntBASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 AC005082.1-201ENST00000413042 2259 ntBASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SYNE2Q8WXH0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 CETN4P-206ENST00000642099 2168 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 MRPL37P1-201ENST00000592451 1337 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 HMGA1P7-201ENST00000406908 502 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 SOCS2P1-201ENST00000417727 557 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 Z97180.1-201ENST00000445173 988 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 EEF1DP1-201ENST00000585891 896 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 LBX2-AS1-202ENST00000603175 2083 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 AC018695.6-201ENST00000614011 534 ntBASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE2Q8WXH0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AL133267.1-201ENST00000398220 340 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 YBX1P6-201ENST00000442962 1002 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms