Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 AC034105.1-201ENST00000563488 319 ntBASIC18.64■□□□□ 0.57
BEST2Q8NFU1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 AL805961.1-202ENST00000641562 540 ntBASIC18.64■□□□□ 0.57
BEST2Q8NFU1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 AL138688.1-201ENST00000624851 1594 ntBASIC18.64■□□□□ 0.57
BEST2Q8NFU1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 AC009947.1-201ENST00000444350 727 ntBASIC18.63■□□□□ 0.57
BEST2Q8NFU1 AC108751.1-201ENST00000490852 363 ntBASIC18.63■□□□□ 0.57
BEST2Q8NFU1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 AL590787.1-201ENST00000568856 1315 ntBASIC18.63■□□□□ 0.57
BEST2Q8NFU1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST2Q8NFU1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 AP002414.1-201ENST00000391405 1147 ntBASIC18.62■□□□□ 0.57
BEST2Q8NFU1 PTCHD3P3-201ENST00000403073 906 ntBASIC18.62■□□□□ 0.57
BEST2Q8NFU1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 POLD2P1-201ENST00000511220 997 ntBASIC18.62■□□□□ 0.57
BEST2Q8NFU1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 AC008667.4-201ENST00000607370 168 ntBASIC18.62■□□□□ 0.57
BEST2Q8NFU1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
BEST2Q8NFU1 PKD1P1-201ENST00000458669 6805 ntBASIC18.62■□□□□ 0.57
BEST2Q8NFU1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.62■□□□□ 0.57
BEST2Q8NFU1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 AC016396.2-201ENST00000562575 1417 ntBASIC18.61■□□□□ 0.57
BEST2Q8NFU1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 IGHV3-65-201ENST00000523210 341 ntBASIC18.61■□□□□ 0.57
BEST2Q8NFU1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 GPALPP1-207ENST00000611650 899 ntBASIC18.61■□□□□ 0.57
BEST2Q8NFU1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.61■□□□□ 0.57
BEST2Q8NFU1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms