Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 IER3-202ENST00000376377 1350 ntBASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 AC022211.2-201ENST00000585075 2527 ntBASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 AC093525.9-201ENST00000624961 1746 ntBASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 TPSP2-201ENST00000561760 610 ntBASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 Z69720.1-201ENST00000601483 472 ntBASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSMEM1Q8N8F7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 SLC25A1P3-201ENST00000395415 828 ntBASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 AP002383.4-201ENST00000442518 975 ntBASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 AD001527.2-201ENST00000622994 785 ntBASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 LINC02012-201ENST00000608206 1725 ntBASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 TP73-AS1-210ENST00000637775 1455 ntBASIC15.91■□□□□ 0.14
LSMEM1Q8N8F7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms